Class Index

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A	AdaptiveBidomainProblem	CvodeData_	LinearSpringWithVariableSpringConstantsForce	QuadraticBasisFunction
AbstractAlgebraicContractionModel	AdaptiveTetrahedralMesh	Cylindrical2dMesh	LinearSystem	QuadraticBasisFunction< 0 >
AbstractAssemblerSolverHybrid	AdhesionPottsUpdateRule	Cylindrical2dVertexMesh	LogFile	QuadraticMesh
AbstractBackwardEulerCardiacCell	AdvectionCaUpdateRule	CylindricalHoneycombMeshGenerator	M	QuadraturePointsGroup
AbstractBidomainSolver	Alarcon2004OxygenBasedCellCycleModel	CylindricalHoneycombVertexMeshGenerator	MassMatrixAssembler	R
AbstractBoundaryCondition	Alarcon2004OxygenBasedCellCycleOdeSystem	D	MechanicsEventHandler	RadialSloughingCellKiller
AbstractBoundaryConditionsContainer	ApcOneHitCellMutationState	DataWriterVariable	MemfemMeshReader	RampedQuarterStimulusCellFactory
AbstractCachedMeshReader	ApcTwoHitCellMutationState	DeformedBoundaryElement	memorypool	RandomCellKiller
AbstractCardiacCell	ApoptoticCellProperty	DeltaNotchCellCycleModel	mesh	RandomNumberGenerator
AbstractCardiacCellFactory	ArchiveLocationInfo	DeltaNotchOdeSystem	MeshalyzerMeshWriter	RegularStimulus
AbstractCardiacCellInterface	ArchiveOpener	DeltaNotchOffLatticeSimulation	MeshBasedCellPopulation	RegularStimulusZeroNetCharge
AbstractCardiacCellWithModifiers	AveragedSourcePde	DifferentialAdhesionPottsUpdateRule	MeshBasedCellPopulationWithGhostNodes	RelativeTo
AbstractCardiacFeVolumeIntegralAssembler	AxisymmetricConductivityTensors	DiffusionCaUpdateRule	MeshPottsWriterIterators	ReplicatableVector
AbstractCardiacMechanicsSolver	B	DiscreteSystemForceCalculator	MeshWriterIterators	RepulsionForce
AbstractCardiacMechanicsSolverInterface	BackwardEulerIvpOdeSolver	DistanceMapCalculator	Mirams2010WntOdeSystem	RungeKutta2IvpOdeSolver
AbstractCardiacProblem	badsubseg	DistributedTetrahedralMesh	MixedDimensionMesh	RungeKutta4IvpOdeSolver
AbstractCardiacTissue	badtriang	DistributedTetrahedralMeshPartitionType	MockEulerIvpOdeSolver	RungeKuttaFehlbergIvpOdeSolver
AbstractCaUpdateRule	BathCellFactory	DistributedVector	MonodomainAssembler	S
AbstractCellBasedSimulation	behavior	DistributedVectorException	MonodomainCorrectionTermAssembler	S1S2Stimulus
AbstractCellBasedTestSuite	BetaCateninOneHitCellMutationState	DistributedVectorFactory	MonodomainProblem	SchmidCostaExponentialLaw2d
AbstractCellCycleModel	BidomainAssembler	DummyModifier	MonodomainSolver	SerializableSingleton
AbstractCellCycleModelOdeSolver	BidomainCorrectionTermAssembler	DynamicCellModelLoader	MonodomainStiffnessMatrixAssembler	SimpleDataWriter
AbstractCellKiller	BidomainMassMatrixAssembler	DynamicModelLoaderRegistry	MonodomainTissue	SimpleLinearEllipticSolver
AbstractCellMutationState	BidomainNeumannSurfaceTermAssembler	DynamicRestitutionStimulus	MooneyRivlinMaterialLaw	SimpleLinearParabolicSolver
AbstractCellPopulation	BidomainProblem	E	MultiStimulus	SimpleNewtonNonlinearSolver
AbstractCellPopulationBoundaryCondition	BidomainSolver	TetrahedralMesh::EdgeIterator	MutableMesh	SimpleNonlinearEllipticSolver
AbstractCellProperty	BidomainTissue	ELASTICITY_SOLVER	MutableVertexMesh	SimpleOxygenBasedCellCycleModel
AbstractCentreBasedCellPopulation	BidomainWithBathAssembler	Electrodes	N	SimplePetscNonlinearSolver
AbstractChasteRegion	BidomainWithBathProblem	ElectrodesStimulusFactory	NagaiHondaForce	SimpleStimulus
AbstractCompressibleMaterialLaw	BoundaryConditionsContainer	ElectroMechanicsProblemDefinition	Nash2004ContractionModel	SimpleUniformSourcePde
AbstractConductivityModifier	BoundaryElement	Element	NashHunterPoleZeroLaw	SimpleWntCellCycleModel
AbstractConductivityTensors	Box	ElementAndWeights	NaturalNeumannSurfaceTermAssembler	SimulationTime
AbstractContinuumMechanicsAssembler	BoxCollection	ElementData	NhsContractionModel	SingleOdeWntCellCycleModel
AbstractContractionModel	BuskeAdhesiveForce	AbstractTetrahedralMesh::ElementIterator	NhsModelWithBackwardSolver	SloughingCellKiller
AbstractConvergenceTester	BuskeCompressionForce	enable_shared_from_this (boost)	Node	SolidMechanicsProblemDefinition
AbstractCorrectionTermAssembler	BuskeElasticForce	EulerIvpOdeSolver	NodeBasedCellPopulation	SpaceConvergenceTester
AbstractCryptStatistics	C	event	NodeBasedCellPopulationWithBuskeUpdate	SphereGeometryBoundaryCondition
AbstractCvodeCell	CaBasedCellPopulation	AbstractLookupTableCollection::EventHandler	AbstractMesh::NodeIterator	splaynode
AbstractCvodeSystem	CARDIAC_CELL	Exception	NodeMap	MeshBasedCellPopulation::SpringIterator
AbstractDataReader	CardiacElectroMechanicsProblem	ExecutableSupport	NodesOnlyMesh	StiffnessMatrixAssembler
AbstractDataWriter	CardiacElectroMechProbRegularGeom	ExplicitCardiacMechanicsSolver	NonCachedTetrahedralMesh	StimulusBoundaryCondition
AbstractDynamicallyLoadableEntity	CardiacNewtonSolver	ExponentialMaterialLaw	noncopyable (boost)	StochasticDurationCellCycleModel
AbstractDynamicLinearPdeSolver	CardiacSimulation	ExtendedBidomainAssembler	NonlinearElasticityTools	StochasticDurationGenerationBasedCellCycleModel
AbstractElement	CardiacSimulationArchiver	ExtendedBidomainMassMatrixAssembler	NonPhysiologicalContractionModel	StochasticOxygenBasedCellCycleModel
AbstractExtendedBidomainSolver	Cell	ExtendedBidomainNeumannSurfaceTermAssembler	null_deleter	StochasticWntCellCycleModel
AbstractFeAssemblerCommon	CellBasedEventHandler	ExtendedBidomainProblem	NumericFileComparison	StokesFlowProblemDefinition
AbstractFeAssemblerInterface	CellBasedPdeHandler	ExtendedBidomainSolver	O	StreeterFibreGenerator
AbstractFeCableIntegralAssembler	CellBasedPdeSolver	ExtendedBidomainTissue	OdeConvergenceTester	DistributedVector::Stripe
AbstractFeSurfaceIntegralAssembler	CellBasedSimulationArchiver	F	OdeLinearSystemSolver	SurfaceAreaConstraintPottsUpdateRule
AbstractFeVolumeIntegralAssembler	CellCycleModelOdeHandler	FactorModifier	OdePdeConvergenceTester	T
AbstractForce	CellCycleModelOdeSolver	FakeBathCell	OdeSolution	TargetedCellKiller
AbstractFunctionalCalculator	CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >	FemlabMeshReader	OdeSystemForCoupledHeatEquation	CxxTest::TestSuite
AbstractHdf5Converter	CellLabel	FibreReader	OdeSystemForCoupledHeatEquationWithSource	TetrahedralMesh
AbstractIncompressibleMaterialLaw	CellMLToSharedLibraryConverter	FibreWriter	OdeSystemInformation	TimeModifier
AbstractIsotropicCompressibleMaterialLaw	CellProperties	FileFinder	OffLatticeSimulation	Timer
AbstractIsotropicIncompressibleMaterialLaw	CellPropertyCollection	XmlTools::Finalizer	OnLatticeSimulation	TimeStepper
AbstractIvpOdeSolver	CellPropertyRegistry	FineCoarseMeshPair	OperatorSplittingMonodomainSolver	TrianglesMeshReader
AbstractLinearEllipticPde	CellsGenerator	FitzHughNagumo1961OdeSystem	OrthotropicConductivityTensors	TrianglesMeshWriter
AbstractLinearParabolicPde	CellwiseData	FixedDurationGenerationBasedCellCycleModel	osub	TysonNovak2001OdeSystem
AbstractLinearParabolicPdeSystemForCoupledOdeSystem	CellwiseDataGradient	FixedModifier	otri	TysonNovakCellCycleModel
AbstractLinearPdeSolver	CellwiseOdeSystemInformation	flipstacker	OutputDirectoryFifoQueue	V
AbstractLookupTableCollection	CellwiseSourcePde	FourthOrderTensor	OutputFileHandler	VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
AbstractMaterialLaw	ChasteBuildInfo	FunctionalBoundaryCondition	OxygenBasedCellKiller	VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
AbstractMesh	ChasteCuboid	G	P	VanLeeuwen2009WntSwatCellCycleOdeSystem
AbstractMeshReader	ChasteEllipsoid	GaussianQuadratureRule	pack< void(T)>	CombinedOdeSystem::VariableParameterMap
AbstractMeshWriter	ChasteNodesList	GeneralisedLinearSpringForce	PapillaryFibreCalculator	version< AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > > (boost::serialization)
AbstractModifier	ChastePoint	GeneralPlaneStimulusCellFactory	ParallelColumnDataWriter	version< AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > > (boost::serialization)
AbstractNonlinearAssemblerSolverHybrid	ChastePoint< 0 >	GenericEventHandler	PCBlockDiagonal	version< AbstractChasteRegion< SPACE_DIM > > (boost::serialization)
AbstractNonlinearElasticitySolver	ChemotacticForce	CxxTest::GlobalFixture	PCBlockDiagonal::PCBlockDiagonalContext	version< AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > > (boost::serialization)
AbstractNonlinearEllipticPde	ChemotaxisPottsUpdateRule	H	PCLDUFactorisation	VertexBasedCellPopulation
AbstractNonlinearSolver	DistributedVector::Chunk	Hdf5DataReader	PCLDUFactorisation::PCLDUFactorisationContext	VertexCryptBoundaryForce
AbstractOdeBasedCellCycleModel	CmguiDeformedSolutionsWriter	Hdf5DataWriter	PCTwoLevelsBlockDiagonal	VertexElement
AbstractOdeBasedContractionModel	CmguiMeshWriter	Hdf5ToCmguiConverter	PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext	VertexElement< 1, SPACE_DIM >
AbstractOdeSystem	CML_noble_varghese_kohl_noble_1998_basic_with_sac	Hdf5ToMeshalyzerConverter	PdeAndBoundaryConditions	VertexElementData
AbstractOdeSystemForCoupledPdeSystem	ColumnDataReader	Hdf5ToTxtConverter	PdeConvergenceTester	VertexMesh::VertexElementIterator
AbstractOdeSystemInformation	ColumnDataWriter	Hdf5ToVtkConverter	PdeSimulationTime	VertexElementMap
AbstractOdeSystemWithAnalyticJacobian	CombinedOdeSystem	HeartConfig	PetscMatTools	VertexMesh
AbstractOffLatticeCellPopulation	CombinedOdeSystemInformation	HeartConfigRelatedCellFactory	PetscSetup	VertexMeshReader
AbstractOneStepIvpOdeSolver	CommandLineArguments	HeartEventHandler	PetscTools	VertexMeshWriter
AbstractOnLatticeCellPopulation	CompareDoubles	HeartFileFinder	PetscVecTools	VoltageInterpolaterOntoMechanicsMesh
AbstractParameterisedSystem	CompressibleExponentialLaw	HeartGeometryInformation	PlaneBasedCellKiller	VolumeConstraintPottsUpdateRule
AbstractPottsUpdateRule	CompressibleMooneyRivlinMaterialLaw	HeartRegionCode	PlaneBoundaryCondition	VolumeDependentAveragedSourcePde
AbstractPurkinjeCellFactory	CompressibleNonlinearElasticitySolver	HeunIvpOdeSolver	PlaneStimulusCellFactory	VolumeTrackedOffLatticeSimulation
AbstractRushLarsenCardiacCell	ConstBoundaryCondition	HoneycombMeshGenerator	PoleZeroMaterialLaw	VtkMeshReader
AbstractSimpleCellCycleModel	ContactInhibitionCellCycleModel	HoneycombVertexMeshGenerator	PolynomialMaterialLaw3d	VtkMeshWriter
AbstractSimpleGenerationBasedCellCycleModel	Node::ContainingBoundaryElementIterator	I	PostProcessingWriter	W
AbstractStaticLinearPdeSolver	Node::ContainingElementIterator	Identifiable	PottsBasedCellPopulation	Warnings
AbstractStimulusFactory	ContinuumMechanicsProblemDefinition	ImplicitCardiacMechanicsSolver	PottsElement	WelikyOsterForce
AbstractStimulusFunction	ContractionModelInputParameters_	IncompressibleNonlinearElasticitySolver	PottsElementData	WildTypeCellMutationState
AbstractTetrahedralElement	CorriasBuistICCModified	CombinedOdeSystemInformation::InstancePointers	PottsMesh::PottsElementIterator	WntCellCycleModel
AbstractTetrahedralElement< 0, SPACE_DIM >	CorriasBuistSMCModified	DistributedVector::Iterator	PottsMesh	WntCellCycleOdeSystem
AbstractTetrahedralMesh	CryptCellsGenerator	AbstractCellPopulation::Iterator	PottsMeshGenerator	WntConcentration
AbstractTetrahedralMeshWriter	CryptProjectionForce	K	PottsMeshReader	X
AbstractTimeAdaptivityController	CryptProjectionStatistics	Kerchoffs2003ContractionModel	PottsMeshWriter	XmlTools
AbstractTwoBodyInteractionForce	CryptSimulation1d	L	ProcessSpecificArchive	XmlTransforms
AbstractUntemplatedCardiacProblem	CryptSimulation2d	LessThanNode	ProgressReporter	Z
AbstractUntemplatedConvergenceTester	CryptSimulationBoundaryCondition	LinearBasisFunction	PropagationPropertiesCalculator	ZeroNetChargeElectrodes
AbstractUntemplatedParameterisedSystem	CryptStatistics	LinearBasisFunction< 0 >	PseudoEcgCalculator	ZeroStimulus
AbstractVanLeeuwen2009WntSwatCellCycleModel	CuboidMeshConstructor	LinearParabolicPdeSystemWithCoupledOdeSystemSolver	Q	ZeroStimulusCellFactory
AbstractWntOdeBasedCellCycleModel	CvodeAdaptor

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