Directories

This directory hierarchy is sorted roughly, but not completely, alphabetically:

• cell_based
  • src
    • common
    • fortests
    • mesh
    • odes
    • population
      • boundary_conditions
      • cell
        • cycle
        • mutations
        • properties
      • killers
      • mechanics
      • pdes
      • update_rules
    • simulation
• continuum_mechanics
  • src
    • common
    • problem
      • material_laws
    • solver
• crypt
  • src
    • boundary_conditions
    • cell
      • cycle
    • killers
    • mechanics
    • odes
    • simulation
    • statistics
• global
  • src
    • checkpointing
    • fortests
    • parallel
    • timing
• heart
  • src
    • convergence
    • fortests
    • io
    • odes
      • contractionmodels
      • ionicmodels
        • noncardiac
    • postprocessing
    • problem
    • solver
      • electrics
        • bidomain
        • extended_bidomain
        • monodomain
      • mechanics
    • stimulus
      • tissue_electrodes
    • tissue
• io
  • src
    • common
    • fortests
    • reader
    • writer
• linalg
  • src
• mesh
  • src
    • 3rdparty
      • tetgen1.4.2
      • triangle
    • common
    • reader
    • utilities
    • vertex
    • writer
• ode
  • src
    • common
    • fortests
    • solver
• pde
  • src
    • common
    • postprocessing
    • problem
    • solver