#include <TrapezoidEdgeVertexMeshWriter.hpp>

Inheritance diagram for TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >:

Collaboration diagram for TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >:

Public Member Functions
	TrapezoidEdgeVertexMeshWriter (const std::string &rDirectory, const std::string &rBaseName, const bool clearOutputDir=true)

void	WriteVtkUsingMesh (VertexMesh< ELEMENT_DIM, SPACE_DIM > &rMesh, const std::string &stamp="")

void	MakeVtkMesh (VertexMesh< ELEMENT_DIM, SPACE_DIM > &rMesh)

void	AddCellData (std::string dataName, std::vector< double > dataPayload)

	~TrapezoidEdgeVertexMeshWriter ()

void	WriteFiles ()

Public Member Functions inherited from AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
	AbstractMeshWriter (const std::string &rDirectory, const std::string &rBaseName, const bool clearOutputDir=true)

virtual	~AbstractMeshWriter ()

std::string	GetOutputDirectory ()

virtual unsigned	GetNumNodes ()

unsigned	GetNumElements ()

unsigned	GetNumBoundaryFaces ()

unsigned	GetNumCableElements ()

virtual std::vector< double >	GetNextNode ()

virtual ElementData	GetNextElement ()

virtual ElementData	GetNextBoundaryElement ()

virtual ElementData	GetNextCableElement ()

void	WriteFilesUsingMeshReader (AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader)

Private Attributes
VertexMesh< ELEMENT_DIM, SPACE_DIM > *	mpMesh = nullptr

vtkUnstructuredGrid *	mpVtkUnstructedMesh = nullptr

Additional Inherited Members
Protected Attributes inherited from AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
OutputFileHandler *	mpOutputFileHandler

std::string	mBaseName

AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > *	mpMeshReader

unsigned	mNumNodes

unsigned	mNumElements

unsigned	mNumBoundaryElements

unsigned	mNumCableElements

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >

A mesh writer class for vertex-based meshes with edge representation. Each edge is associated with trapezoid such that the base is the edge and the sides are parallel to the line joining the cell's centroid and the nodes. __ __ / \ / \ / \ / \ | | |\ /| | | | | | | | | ==> |/ | \ / \ / \ __ / \ __ /

Definition at line 83 of file TrapezoidEdgeVertexMeshWriter.hpp.

Constructor & Destructor Documentation

◆ TrapezoidEdgeVertexMeshWriter()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::TrapezoidEdgeVertexMeshWriter	(	const std::string &	rDirectory,
		const std::string &	rBaseName,
		const bool	clearOutputDir = `true`
	)

Constructor.

Parameters

rDirectory	reference to the output directory, relative to where Chaste output is stored
rBaseName	reference to the base name for results files
clearOutputDir	whether to clear the output directory prior to writing files

Definition at line 39 of file TrapezoidEdgeVertexMeshWriter.cpp.

References TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpVtkUnstructedMesh.

◆ ~TrapezoidEdgeVertexMeshWriter()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::~TrapezoidEdgeVertexMeshWriter ( )

Destructor.

Definition at line 51 of file TrapezoidEdgeVertexMeshWriter.cpp.

Member Function Documentation

◆ AddCellData()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::AddCellData	(	std::string	dataName,
		std::vector< double >	dataPayload
	)

Add data to a future VTK file.

Parameters

dataName	a tag to go into the VTK file
dataPayload	a pay-load of length (number of elements)

Definition at line 200 of file TrapezoidEdgeVertexMeshWriter.cpp.

Referenced by VertexBasedCellPopulation< DIM >::WriteCellEdgeVtkResultsToFile().

◆ MakeVtkMesh()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::MakeVtkMesh ( VertexMesh< ELEMENT_DIM, SPACE_DIM > & rMesh )

Populate mpVtkUnstructedMesh using a vertex-based mesh. Called by WriteVtkUsingMesh().

Parameters

rMesh reference to the vertex-based mesh

Definition at line 96 of file TrapezoidEdgeVertexMeshWriter.cpp.

References VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetCentroidOfElement(), VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetElement(), VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetElementIteratorBegin(), VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetElementIteratorEnd(), AbstractMesh< ELEMENT_DIM, SPACE_DIM >::GetNode(), VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetNumElements(), and VertexMesh< ELEMENT_DIM, SPACE_DIM >::GetNumNodes().

◆ WriteFiles()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles ( )

virtual

Write mesh data to files. This method must be overridden in concrete classes.

Implements AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 217 of file TrapezoidEdgeVertexMeshWriter.cpp.

◆ WriteVtkUsingMesh()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void TrapezoidEdgeVertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteVtkUsingMesh	(	VertexMesh< ELEMENT_DIM, SPACE_DIM > &	rMesh,
		const std::string &	stamp = `""`
	)