AbstractCellMutationState Class Reference

#include <AbstractCellMutationState.hpp>

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List of all members.

Public Member Functions

 AbstractCellMutationState (unsigned colour)
virtual ~AbstractCellMutationState ()
unsigned GetColour () const

Private Member Functions

template<class Archive>
void serialize (Archive &archive, const unsigned int version)
 AbstractCellMutationState ()

Private Attributes

unsigned mColour

Friends

class boost::serialization::access


Detailed Description

Base class for cell mutation states.

Each Cell has a (shared pointer to a) mutation state instance, which will be an instance of a subclass of this class. When setting up a CellBasedSimulation, the user must specify a list of AbstractCellMutationState instances, which represent the possible mutations that can occur in the simulation (including WildTypeCellMutationState). This provides a registry of available mutation states, and cells will point to one of these objects.

The mutation state objects keep track of the number of cells in a given mutation state, as well as what colour should be used by the visualizer to display cells in each state.

Definition at line 50 of file AbstractCellMutationState.hpp.


Constructor & Destructor Documentation

AbstractCellMutationState::AbstractCellMutationState (  )  [private]

Default constructor needs to be defined for archiving, but never actually used, since subclasses call the normal constructor.

Definition at line 32 of file AbstractCellMutationState.cpp.

References NEVER_REACHED.

AbstractCellMutationState::AbstractCellMutationState ( unsigned  colour  ) 

Constructor.

Parameters:
colour what colour cells with this mutation state should be in the visualizer

Definition at line 38 of file AbstractCellMutationState.cpp.

AbstractCellMutationState::~AbstractCellMutationState (  )  [virtual]

Virtual destructor, to make this class polymorphic.

Definition at line 44 of file AbstractCellMutationState.cpp.


Member Function Documentation

template<class Archive>
void AbstractCellMutationState::serialize ( Archive &  archive,
const unsigned int  version 
) [inline, private]

Archive the member variables.

Parameters:
archive the archive
version the current version of this class

Reimplemented from AbstractCellProperty.

Reimplemented in ApcOneHitCellMutationState, ApcTwoHitCellMutationState, BetaCateninOneHitCellMutationState, and WildTypeCellMutationState.

Definition at line 68 of file AbstractCellMutationState.hpp.

References mColour.

unsigned AbstractCellMutationState::GetColour (  )  const

Get mColour.

Definition at line 48 of file AbstractCellMutationState.cpp.

References mColour.


Friends And Related Function Documentation

friend class boost::serialization::access [friend]


Member Data Documentation

Colour for use by visualizer.

Definition at line 57 of file AbstractCellMutationState.hpp.

Referenced by GetColour(), and serialize().


The documentation for this class was generated from the following files:

Generated on Mon Nov 1 12:35:36 2010 for Chaste by  doxygen 1.5.5