DivisionBiasTrackingModifier.hpp

/*
 
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*/
 
#ifndef DIVISIONBIASTRACKINGMODIFIER_HPP_
#define DIVISIONBIASTRACKINGMODIFIER_HPP_
 
#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
 
#include "AbstractCellBasedSimulationModifier.hpp"
 
template<unsigned DIM>
class DivisionBiasTrackingModifier : public AbstractCellBasedSimulationModifier<DIM,DIM>
{
private:
 
    c_vector<double, DIM> mDivisionBiasVector;
 
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCellBasedSimulationModifier<DIM,DIM> >(*this);
    }
 
public:
 
    DivisionBiasTrackingModifier(c_vector<double, DIM> divisionBiasVector);
 
    virtual ~DivisionBiasTrackingModifier();
 
    const c_vector<double, DIM>& rGetDivisionBiasVector() const;
 
    virtual void UpdateAtEndOfTimeStep(AbstractCellPopulation<DIM,DIM>& rCellPopulation);
 
    virtual void SetupSolve(AbstractCellPopulation<DIM,DIM>& rCellPopulation, std::string outputDirectory);
 
    void UpdateCellData(AbstractCellPopulation<DIM,DIM>& rCellPopulation);
 
    void OutputSimulationModifierParameters(out_stream& rParamsFile);
};
 
#include "SerializationExportWrapper.hpp"
EXPORT_TEMPLATE_CLASS_SAME_DIMS(DivisionBiasTrackingModifier)
 
namespace boost
{
namespace serialization
{
template<class Archive, unsigned DIM>
inline void save_construct_data(
    Archive & ar, const DivisionBiasTrackingModifier<DIM>* t, const unsigned int file_version)
{
    // Archive c_vector one component at a time
    c_vector<double, DIM> point = t->rGetDivisionBiasVector();
    for (unsigned i=0; i<DIM; i++)
    {
        ar << point[i];
    }
}
 
template<class Archive, unsigned DIM>
inline void load_construct_data(
    Archive & ar, DivisionBiasTrackingModifier<DIM>* t, const unsigned int file_version)
{
    // Retrieve c_vector one component at a time
    c_vector<double, DIM> point;
    for (unsigned i=0; i<DIM; i++)
    {
        ar >> point[i];
    }
 
    // Invoke inplace constructor to initialise instance
    ::new(t)DivisionBiasTrackingModifier<DIM>(point);
}
}
} // namespace ...
 
#endif /*DIVISIONBIASTRACKINGMODIFIER_HPP_*/