Chaste Commit::f2ff7ee04e70ac9d06c57344df8d017dbb12b97b
AbstractUntemplatedParameterisedSystem.hpp
1/*
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34*/
35
36#ifndef ABSTRACTUNTEMPLATEDPARAMETERISEDSYSTEM_HPP_
37#define ABSTRACTUNTEMPLATEDPARAMETERISEDSYSTEM_HPP_
38
39#include <vector>
40#include <string>
41#include <boost/shared_ptr.hpp>
42
43#include "AbstractOdeSystemInformation.hpp"
44
54{
55public:
61 AbstractUntemplatedParameterisedSystem(unsigned numberOfStateVariables);
62
65
69 boost::shared_ptr<const AbstractOdeSystemInformation> GetSystemInformation() const;
70
74 std::string GetSystemName() const;
75
76 //
77 // Attribute methods
78 //
79
83 unsigned GetNumberOfAttributes() const;
84
89 bool HasAttribute(const std::string& rName) const;
90
95 double GetAttribute(const std::string& rName) const;
96
97 //
98 // State variable methods
99 //
100
106 unsigned GetNumberOfStateVariables() const;
107
111 const std::vector<std::string>& rGetStateVariableNames() const;
112
116 const std::vector<std::string>& rGetStateVariableUnits() const;
117
128 unsigned GetStateVariableIndex(const std::string& rName) const;
129
138 bool HasStateVariable(const std::string& rName) const;
139
147 std::string GetStateVariableUnits(unsigned index) const;
148
152 virtual void ResetToInitialConditions()=0;
153
154 //
155 // Parameter methods
156 //
157
161 unsigned GetNumberOfParameters() const;
162
166 const std::vector<std::string>& rGetParameterNames() const;
167
171 const std::vector<std::string>& rGetParameterUnits() const;
172
182 unsigned GetParameterIndex(const std::string& rName) const;
183
192 bool HasParameter(const std::string& rName) const;
193
201 std::string GetParameterUnits(unsigned index) const;
202
203 //
204 // Derived quantity methods
205 //
206
210 unsigned GetNumberOfDerivedQuantities() const;
211
215 const std::vector<std::string>& rGetDerivedQuantityNames() const;
216
220 const std::vector<std::string>& rGetDerivedQuantityUnits() const;
221
227 unsigned GetDerivedQuantityIndex(const std::string& rName) const;
228
237 bool HasDerivedQuantity(const std::string& rName) const;
238
245 std::string GetDerivedQuantityUnits(unsigned index) const;
246
247 //
248 // "Any variable" methods
249 //
250
259 unsigned GetAnyVariableIndex(const std::string& rName) const;
260
270 bool HasAnyVariable(const std::string& rName) const;
271
279 std::string GetAnyVariableUnits(unsigned index) const;
280
288 std::string GetAnyVariableUnits(const std::string& rName) const;
289
290
291protected:
294
301 boost::shared_ptr<AbstractOdeSystemInformation> mpSystemInfo;
302};
303
304#endif /*ABSTRACTUNTEMPLATEDPARAMETERISEDSYSTEM_HPP_*/
const std::vector< std::string > & rGetDerivedQuantityNames() const
const std::vector< std::string > & rGetParameterNames() const
boost::shared_ptr< const AbstractOdeSystemInformation > GetSystemInformation() const
boost::shared_ptr< AbstractOdeSystemInformation > mpSystemInfo
unsigned GetDerivedQuantityIndex(const std::string &rName) const
const std::vector< std::string > & rGetStateVariableNames() const
unsigned GetStateVariableIndex(const std::string &rName) const
const std::vector< std::string > & rGetStateVariableUnits() const
unsigned GetAnyVariableIndex(const std::string &rName) const
unsigned GetParameterIndex(const std::string &rName) const
const std::vector< std::string > & rGetDerivedQuantityUnits() const
const std::vector< std::string > & rGetParameterUnits() const