AbstractOdeBasedCellCycleModel.hpp

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*/
 
#ifndef ABSTRACTODEBASEDCELLCYCLEMODEL_HPP_
#define ABSTRACTODEBASEDCELLCYCLEMODEL_HPP_
 
#include <vector>
 
#include "ChasteSerialization.hpp"
#include "ClassIsAbstract.hpp"
#include <boost/serialization/base_object.hpp>
 
#include "AbstractCellCycleModel.hpp"
#include "CellCycleModelOdeHandler.hpp"
#include "SimulationTime.hpp"
 
class AbstractOdeBasedCellCycleModel : public AbstractCellCycleModel, public CellCycleModelOdeHandler
{
private:
 
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCellCycleModel>(*this);
        archive & boost::serialization::base_object<CellCycleModelOdeHandler>(*this);
        archive & mDivideTime;
    }
 
protected:
 
    double mDivideTime;
 
    AbstractOdeBasedCellCycleModel(const AbstractOdeBasedCellCycleModel& rModel);
 
public:
 
    AbstractOdeBasedCellCycleModel(double lastTime = SimulationTime::Instance()->GetTime(),
                                   boost::shared_ptr<AbstractCellCycleModelOdeSolver> pOdeSolver = boost::shared_ptr<AbstractCellCycleModelOdeSolver>());
 
    virtual ~AbstractOdeBasedCellCycleModel();
 
    double GetOdeStopTime();
 
    void SetBirthTime(double birthTime);
 
    virtual bool ReadyToDivide();
 
    virtual void ResetForDivision();
 
    virtual void OutputCellCycleModelParameters(out_stream& rParamsFile);
};
 
CLASS_IS_ABSTRACT(AbstractOdeBasedCellCycleModel)
 
#endif /*ABSTRACTODEBASDCELLCYCLEMODEL_HPP_*/