FitzHughNagumo1961OdeSystem Class Reference

#include <FitzHughNagumo1961OdeSystem.hpp>

Inheritance diagram for FitzHughNagumo1961OdeSystem:

Collaboration diagram for FitzHughNagumo1961OdeSystem:

List of all members.

Public Member Functions
	FitzHughNagumo1961OdeSystem (boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)
	~FitzHughNagumo1961OdeSystem ()
void	EvaluateYDerivatives (double time, const std::vector< double > &rY, std::vector< double > &rDY)
double	GetIIonic (const std::vector< double > *pStateVariables=NULL)
Static Private Attributes
static const double	mAlpha = -0.08
static const double	mGamma = 3.00
static const double	mEpsilon = 0.005

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Detailed Description

Represents the FitzHugh-Nagumo system of ODEs.

Definition at line 45 of file FitzHughNagumo1961OdeSystem.hpp.

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Constructor & Destructor Documentation

FitzHughNagumo1961OdeSystem::FitzHughNagumo1961OdeSystem	(	boost::shared_ptr< AbstractIvpOdeSolver >	pOdeSolver,
		boost::shared_ptr< AbstractStimulusFunction >	pIntracellularStimulus
	)

Constructor

Parameters:

pOdeSolver	is a pointer to the ODE solver
pIntracellularStimulus	is a pointer to the intracellular stimulus

Definition at line 47 of file FitzHughNagumo1961OdeSystem.cpp.

References AbstractCardiacCell::Init(), and AbstractUntemplatedParameterisedSystem::mpSystemInfo.

FitzHughNagumo1961OdeSystem::~FitzHughNagumo1961OdeSystem

(

void

)

Destructor

Definition at line 57 of file FitzHughNagumo1961OdeSystem.cpp.

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Member Function Documentation

void FitzHughNagumo1961OdeSystem::EvaluateYDerivatives	(	double	time,
		const std::vector< double > &	rY,
		std::vector< double > &	rDY
	)		[virtual]

Compute the RHS of the FitHugh-Nagumo system of ODEs

Parameters:

time	the current time, in milliseconds
rY	current values of the state variables
rDY	to be filled in with derivatives

Implements AbstractOdeSystem.

Definition at line 61 of file FitzHughNagumo1961OdeSystem.cpp.

References AbstractCardiacCellInterface::GetIntracellularAreaStimulus(), mAlpha, mEpsilon, mGamma, and AbstractCardiacCellInterface::mSetVoltageDerivativeToZero.

double FitzHughNagumo1961OdeSystem::GetIIonic

(

const std::vector< double > *

pStateVariables = NULL

)

[virtual]

Calculates the ionic current.

Parameters:

pStateVariables

optionally can be supplied to evaluate the ionic current at the given state; by default the cell's internal state will be used.

Returns:

the total ionic current

Implements AbstractCardiacCellInterface.

Definition at line 83 of file FitzHughNagumo1961OdeSystem.cpp.

References mAlpha, AbstractParameterisedSystem< std::vector< double > >::mStateVariables, and AbstractCardiacCellInterface::mVoltageIndex.

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Member Data Documentation

const double FitzHughNagumo1961OdeSystem::mAlpha = -0.08 [static, private]

Constant parameter alpha

Definition at line 48 of file FitzHughNagumo1961OdeSystem.hpp.

Referenced by EvaluateYDerivatives(), and GetIIonic().

const double FitzHughNagumo1961OdeSystem::mEpsilon = 0.005 [static, private]

Constant parameter epsilon

Definition at line 50 of file FitzHughNagumo1961OdeSystem.hpp.

Referenced by EvaluateYDerivatives().

const double FitzHughNagumo1961OdeSystem::mGamma = 3.00 [static, private]

Constant parameter gamma

Definition at line 49 of file FitzHughNagumo1961OdeSystem.hpp.

Referenced by EvaluateYDerivatives().

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The documentation for this class was generated from the following files:

• heart/src/odes/ionicmodels/FitzHughNagumo1961OdeSystem.hpp
• heart/src/odes/ionicmodels/FitzHughNagumo1961OdeSystem.cpp