Chaste Release::3.1
ExecutableSupport Class Reference

#include <ExecutableSupport.hpp>

Collaboration diagram for ExecutableSupport:

List of all members.

Static Public Member Functions

static void InitializePetsc (int *pArgc, char ***pArgv)
static void ShowCopyright ()
static void ShowParallelLaunching ()
static void SetOutputDirectory (const std::string &rOutputDirectory)
static void WriteMachineInfoFile (std::string fileBaseName)
static void WriteProvenanceInfoFile ()
static void WriteLibraryInfo (out_stream &outFile)
static void StandardStartup (int *pArgc, char ***pArgv)
static void PrintError (const std::string &rMessage, bool masterOnly=false)
static void Print (const std::string &rMessage)
static void FinalizePetsc ()

Static Public Attributes

static const int EXIT_OK = 0
static const int EXIT_ERROR = 1
static const int EXIT_BAD_ARGUMENTS = 2

Static Private Attributes

static FileFinder mOutputDirectory

Detailed Description

Various helpful static methods for people writing their own executables within the Chaste framework.

Most executables will just need to call StandardStartup as the first thing in their main() function, and FinalizePetsc before quitting. The other methods allow you to fine-tune what output is presented to users.

Definition at line 51 of file ExecutableSupport.hpp.


Member Function Documentation

void ExecutableSupport::FinalizePetsc ( ) [static]

Shut down PETSc so we exit cleanly.

Definition at line 284 of file ExecutableSupport.cpp.

void ExecutableSupport::InitializePetsc ( int *  pArgc,
char ***  pArgv 
) [static]

Initialise PETSc from the command line arguments.

Parameters:
pArgcpointer to the number of arguments
pArgvpointer to the argument list

Definition at line 77 of file ExecutableSupport.cpp.

References RelativeTo::ChasteTestOutput, CommandLineArguments::Instance(), FileFinder::IsPathSet(), mOutputDirectory, CommandLineArguments::p_argc, CommandLineArguments::p_argv, and FileFinder::SetPath().

Referenced by StandardStartup().

void ExecutableSupport::Print ( const std::string &  rMessage) [static]

Display an informative message to the user, on stdout. Message is only displayed by master process

Parameters:
rMessagethe message to display

Definition at line 275 of file ExecutableSupport.cpp.

References PetscTools::AmMaster().

void ExecutableSupport::PrintError ( const std::string &  rMessage,
bool  masterOnly = false 
) [static]

Display an error message to the user, on stderr.

Parameters:
rMessagethe message to display
masterOnlywhether only the master process should display the error

Definition at line 259 of file ExecutableSupport.cpp.

References PetscTools::AmMaster(), RelativeTo::ChasteTestOutput, PetscTools::GetMyRank(), FileFinder::IsPathSet(), mOutputDirectory, OutputFileHandler::OpenOutputFile(), and FileFinder::SetPath().

void ExecutableSupport::SetOutputDirectory ( const std::string &  rOutputDirectory) [static]

Set the directory to which the files created by WriteMachineInfoFile, and WriteProvenanceInfoFile will be written. By default they will write to the CHASTE_TEST_OUTPUT folder.

Parameters:
rOutputDirectorythe directory to write to

Definition at line 65 of file ExecutableSupport.cpp.

References RelativeTo::Absolute, RelativeTo::ChasteTestOutput, FileFinder::IsAbsolutePath(), mOutputDirectory, and FileFinder::SetPath().

Referenced by CardiacSimulation::CardiacSimulation().

void ExecutableSupport::ShowCopyright ( ) [static]
void ExecutableSupport::ShowParallelLaunching ( ) [static]

Output extra diagnostics when Chaste is launched in parallel.

Definition at line 109 of file ExecutableSupport.cpp.

References PetscTools::BeginRoundRobin(), PetscTools::EndRoundRobin(), PetscTools::GetMyRank(), PetscTools::GetNumProcs(), and PetscTools::IsParallel().

Referenced by StandardStartup().

void ExecutableSupport::StandardStartup ( int *  pArgc,
char ***  pArgv 
) [static]

Call InitializePetsc, ShowCopyright, then ShowParallelLaunching.

Parameters:
pArgcpointer to the number of arguments
pArgvpointer to the argument list

Definition at line 252 of file ExecutableSupport.cpp.

References InitializePetsc(), ShowCopyright(), and ShowParallelLaunching().

void ExecutableSupport::WriteMachineInfoFile ( std::string  fileBaseName) [static]

Write to log files information about the machine that ran the code. Each process will output its own file.

Parameters:
fileBaseNamebase name of the file to write to

Definition at line 121 of file ExecutableSupport.cpp.

References RelativeTo::ChasteTestOutput, PetscTools::GetMyRank(), PetscTools::GetNumProcs(), FileFinder::IsPathSet(), mOutputDirectory, OutputFileHandler::OpenOutputFile(), and FileFinder::SetPath().

Referenced by CardiacSimulation::CardiacSimulation(), and AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >::OutputSimulationSetup().

void ExecutableSupport::WriteProvenanceInfoFile ( ) [static]

Member Data Documentation

const int ExecutableSupport::EXIT_BAD_ARGUMENTS = 2 [static]

Standard exit codes for executables to return from main(): bad arguments passed on command line.

Definition at line 147 of file ExecutableSupport.hpp.

const int ExecutableSupport::EXIT_ERROR = 1 [static]

Standard exit codes for executables to return from main(): exception thrown during execution.

Definition at line 141 of file ExecutableSupport.hpp.

const int ExecutableSupport::EXIT_OK = 0 [static]

Standard exit codes for executables to return from main(): successful termination.

Definition at line 135 of file ExecutableSupport.hpp.

The output directory to put machine provenance information into.

Definition at line 151 of file ExecutableSupport.hpp.

Referenced by InitializePetsc(), PrintError(), SetOutputDirectory(), WriteMachineInfoFile(), and WriteProvenanceInfoFile().


The documentation for this class was generated from the following files: