Kerchoffs2003ContractionModel.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef KERCHOFFS2003CONTRACTIONMODEL_HPP_
00030 #define KERCHOFFS2003CONTRACTIONMODEL_HPP_
00031 
00032 #include "AbstractOdeBasedContractionModel.hpp"
00033 #include "OdeSystemInformation.hpp"
00034 #include <math.h>
00035 
00041 class Kerchoffs2003ContractionModel : public AbstractOdeBasedContractionModel
00042 {
00043 friend class TestContractionModels;
00044 
00045 private:
00046     static const double a6;  
00047     static const double a7;  
00048     static const double T0;  
00049     static const double Ea;  
00050     static const double v0;  
00051     static const double ls0; 
00052     static const double tr;  
00053     static const double td;  
00054     static const double b;   
00055     static const double ld;  
00058     static const double mActivationVoltage = 0;
00060     static const double mDeactivationVoltage = -70;
00061 
00063     double mSarcomereLength;
00065     double mActivationTime;
00069     bool mIsActivated;
00072     bool mElectricallyUnactivated;
00073 
00079     double GetActiveTension(double lengthOfContractileElement);
00080 
00081 
00082 public:
00084     Kerchoffs2003ContractionModel();
00085 
00086 
00093     void EvaluateYDerivatives(double time, const std::vector<double>& rY, std::vector<double>& rDY);
00094 
00100     void SetInputParameters(ContractionModelInputParameters& rInputParameters);
00101 
00107     void SetStretchAndStretchRate(double stretch, double stretchRate);
00108 
00112     double GetActiveTension();
00113 
00117     bool IsStretchDependent()
00118     {
00119         return true;
00120     }
00121 
00125     bool IsStretchRateDependent()
00126     {
00127         return false;
00128     }
00129 
00134     double GetNextActiveTension();
00135 };
00136 
00137 
00138 #endif /*KERCHOFFS2003CONTRACTIONMODEL_HPP_*/
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