AbstractTwoBodyInteractionForce.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef ABSTRACTTWOBODYINTERACTIONFORCE_HPP_
00030 #define ABSTRACTTWOBODYINTERACTIONFORCE_HPP_
00031 
00032 #include "AbstractForce.hpp"
00033 #include "MeshBasedCellPopulation.hpp"
00034 #include "NodeBasedCellPopulation.hpp"
00038 template<unsigned DIM>
00039 class AbstractTwoBodyInteractionForce : public AbstractForce<DIM>
00040 {
00041 private:
00042 
00044     friend class boost::serialization::access;
00051     template<class Archive>
00052     void serialize(Archive & archive, const unsigned int version)
00053     {
00054         archive & boost::serialization::base_object<AbstractForce<DIM> >(*this);
00055         archive & mUseCutOffLength;
00056         archive & mMechanicsCutOffLength;
00057     }
00058 
00059 protected:
00060 
00062     bool mUseCutOffLength;
00063 
00065     double mMechanicsCutOffLength;
00066 
00067 public:
00068 
00072     AbstractTwoBodyInteractionForce();
00073 
00079     bool GetUseCutOffLength();
00080 
00087     void SetCutOffLength(double cutOffLength);
00088 
00094     double GetCutOffLength();
00095 
00107     virtual c_vector<double, DIM> CalculateForceBetweenNodes(unsigned nodeAGlobalIndex, unsigned nodeBGlobalIndex, AbstractCellPopulation<DIM>& rCellPopulation)=0;
00108 
00115     void AddForceContribution(std::vector<c_vector<double, DIM> >& rForces,
00116                               AbstractCellPopulation<DIM>& rCellPopulation);
00117 
00123     virtual void OutputForceParameters(out_stream& rParamsFile);
00124 };
00125 
00126 #endif /*ABSTRACTTWOBODYINTERACTIONFORCE_HPP_*/
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