AbstractPurkinjeCellFactory.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef ABSTRACTPURKINJECELLFACTORY_HPP_
00030 #define ABSTRACTPURKINJECELLFACTORY_HPP_
00031 
00032 #include "AbstractCardiacCellFactory.hpp"
00033 #include "MixedDimensionMesh.hpp"
00034 #include "FakeBathCell.hpp"
00041 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM>
00042 class AbstractPurkinjeCellFactory : public AbstractCardiacCellFactory<ELEMENT_DIM,SPACE_DIM>
00043 {
00044 protected:
00046     MixedDimensionMesh<ELEMENT_DIM,SPACE_DIM>* mpMixedDimensionMesh;
00047 
00049     std::set<unsigned> mLocalPurkinjeNodes;
00054     virtual AbstractCardiacCell* CreatePurkinjeCellForTissueNode(unsigned nodeIndex)=0;
00055 
00056 public:
00057 
00058     /* Constructor does nothing */
00059     AbstractPurkinjeCellFactory();
00060 
00061 
00064     void SetMesh(AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* pMesh);
00065 
00075     AbstractCardiacCell* CreatePurkinjeCellForNode(unsigned nodeIndex);
00076 
00085     virtual void FinalisePurkinjeCellCreation(std::vector< AbstractCardiacCell* >* pPurkinjeCellsDistributed,
00086                                               unsigned lo, unsigned hi)
00087     {
00088     }
00089 
00094     MixedDimensionMesh<ELEMENT_DIM,SPACE_DIM>* GetMixedDimensionMesh();
00095 };
00096 
00097 
00098 
00099 #endif // ABSTRACTPURKINJECELLFACTORY_HPP_
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