Chaste  Release::2017.1
RadialSloughingCellKiller.hpp
1 /*
2 
3 Copyright (c) 2005-2017, University of Oxford.
4 All rights reserved.
5 
6 University of Oxford means the Chancellor, Masters and Scholars of the
7 University of Oxford, having an administrative office at Wellington
8 Square, Oxford OX1 2JD, UK.
9 
10 This file is part of Chaste.
11 
12 Redistribution and use in source and binary forms, with or without
13 modification, are permitted provided that the following conditions are met:
14  * Redistributions of source code must retain the above copyright notice,
15  this list of conditions and the following disclaimer.
16  * Redistributions in binary form must reproduce the above copyright notice,
17  this list of conditions and the following disclaimer in the documentation
18  and/or other materials provided with the distribution.
19  * Neither the name of the University of Oxford nor the names of its
20  contributors may be used to endorse or promote products derived from this
21  software without specific prior written permission.
22 
23 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
25 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
26 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
27 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
28 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
29 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
30 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
31 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
32 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
33 
34 */
35 
36 #ifndef RADIALSLOUGHINGCELLKILLER_HPP_
37 #define RADIALSLOUGHINGCELLKILLER_HPP_
38 
39 #include "AbstractCellKiller.hpp"
40 
41 #include "ChasteSerialization.hpp"
42 #include <boost/serialization/base_object.hpp>
43 
51 {
52 private:
53 
55  c_vector<double,2> mCentre;
56 
58  double mRadius;
59 
60  friend class boost::serialization::access;
68  template<class Archive>
69  void serialize(Archive & archive, const unsigned int version)
70  {
71  archive & boost::serialization::base_object<AbstractCellKiller<2> >(*this);
72  }
73 
74 public:
75 
84  c_vector<double,2> centre,
85  double radius);
86 
90  c_vector<double,2> GetCentre() const;
91 
95  double GetRadius() const;
96 
101 
110  void OutputCellKillerParameters(out_stream& rParamsFile);
111 };
112 
115 
116 namespace boost
117 {
118 namespace serialization
119 {
123 template<class Archive>
124 inline void save_construct_data(
125  Archive & ar, const RadialSloughingCellKiller * t, const unsigned int file_version)
126 {
127  // Save data required to construct instance
128  const AbstractCellPopulation<2>* const p_cell_population = t->GetCellPopulation();
129  ar & p_cell_population;
130  c_vector<double,2> centre = t->GetCentre();
131  ar & centre[0];
132  ar & centre[1];
133  double radius = t->GetRadius();
134  ar & radius;
135 }
136 
140 template<class Archive>
141 inline void load_construct_data(
142  Archive & ar, RadialSloughingCellKiller * t, const unsigned int file_version)
143 {
144  // Retrieve data from archive required to construct new instance
145  AbstractCellPopulation<2>* p_cell_population;
146  ar & p_cell_population;
147  c_vector<double,2> centre;
148  ar & centre[0];
149  ar & centre[1];
150  double radius;
151  ar & radius;
152 
153  // Invoke inplace constructor to initialise instance
154  ::new(t)RadialSloughingCellKiller(p_cell_population, centre, radius);
155 }
156 }
157 } // namespace ...
158 
159 
160 #endif /*RADIALSLOUGHINGCELLKILLER_HPP_*/
161 
virtual void CheckAndLabelCellsForApoptosisOrDeath()
const AbstractCellPopulation< SPACE_DIM > * GetCellPopulation() const
void OutputCellKillerParameters(out_stream &rParamsFile)
void serialize(Archive &archive, const unsigned int version)
RadialSloughingCellKiller(AbstractCellPopulation< 2 > *pCellPopulation, c_vector< double, 2 > centre, double radius)
c_vector< double, 2 > GetCentre() const
#define CHASTE_CLASS_EXPORT(T)
gcov doesn&#39;t like this file...