Chaste  Release::2017.1
IncompressibleNonlinearElasticitySolver.hpp
1 /*
2 
3 Copyright (c) 2005-2017, University of Oxford.
4 All rights reserved.
5 
6 University of Oxford means the Chancellor, Masters and Scholars of the
7 University of Oxford, having an administrative office at Wellington
8 Square, Oxford OX1 2JD, UK.
9 
10 This file is part of Chaste.
11 
12 Redistribution and use in source and binary forms, with or without
13 modification, are permitted provided that the following conditions are met:
14  * Redistributions of source code must retain the above copyright notice,
15  this list of conditions and the following disclaimer.
16  * Redistributions in binary form must reproduce the above copyright notice,
17  this list of conditions and the following disclaimer in the documentation
18  and/or other materials provided with the distribution.
19  * Neither the name of the University of Oxford nor the names of its
20  contributors may be used to endorse or promote products derived from this
21  software without specific prior written permission.
22 
23 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
25 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
26 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
27 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
28 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
29 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
30 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
31 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
32 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
33 
34 */
35 #ifndef INCOMPRESSIBLENONLINEARELASTICITYSOLVER_HPP_
36 #define INCOMPRESSIBLENONLINEARELASTICITYSOLVER_HPP_
37 
38 /*
39  * NOTE ON COMPILATION ERRORS:
40  *
41  * This file won't compile with Intel icpc version 9.1.039, with error message:
42  * "Terminate with:
43  (0): internal error: backend signals"
44  *
45  * Try recompiling with icpc version 10.0.025.
46  */
47 
48 #include "AbstractNonlinearElasticitySolver.hpp"
49 #include "AbstractIncompressibleMaterialLaw.hpp"
50 
51 
59 template<size_t DIM>
61 {
62  friend class TestIncompressibleNonlinearElasticitySolver;
63  friend class TestCompressibleNonlinearElasticitySolver;
64  friend class TestNonlinearElasticityAdjointSolver;
65  friend class AdaptiveNonlinearElasticityProblem;
66 
67 protected:
68 
71 
74 
77 
82  static const size_t STENCIL_SIZE = DIM*NUM_NODES_PER_ELEMENT + NUM_VERTICES_PER_ELEMENT;
83 
86 
87 
106  virtual void AssembleOnElement(Element<DIM, DIM>& rElement,
107  c_matrix<double, STENCIL_SIZE, STENCIL_SIZE >& rAElem,
108  c_matrix<double, STENCIL_SIZE, STENCIL_SIZE >& rAElemPrecond,
109  c_vector<double, STENCIL_SIZE>& rBElem,
110  bool assembleResidual,
111  bool assembleJacobian);
112 
127  void FormInitialGuess();
128 
138  void AssembleSystem(bool assembleResidual, bool assembleJacobian);
139 
140 public:
141 
150  SolidMechanicsProblemDefinition<DIM>& rProblemDefinition,
151  std::string outputDirectory);
152 
153 
156  {
157  }
158 };
159 
160 #endif /*INCOMPRESSIBLENONLINEARELASTICITYSOLVER_HPP_*/
virtual void AssembleOnElement(Element< DIM, DIM > &rElement, c_matrix< double, STENCIL_SIZE, STENCIL_SIZE > &rAElem, c_matrix< double, STENCIL_SIZE, STENCIL_SIZE > &rAElemPrecond, c_vector< double, STENCIL_SIZE > &rBElem, bool assembleResidual, bool assembleJacobian)
void AssembleSystem(bool assembleResidual, bool assembleJacobian)
IncompressibleNonlinearElasticitySolver(AbstractTetrahedralMesh< DIM, DIM > &rQuadMesh, SolidMechanicsProblemDefinition< DIM > &rProblemDefinition, std::string outputDirectory)