Chaste  Release::2017.1
ChastePoint.hpp
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35 
36 
37 #ifndef _CHASTEPOINT_HPP_
38 #define _CHASTEPOINT_HPP_
39 
40 #include "ChasteSerialization.hpp"
41 #include "UblasVectorInclude.hpp"
42 #include <vector>
43 
44 
48 template<unsigned DIM>
50 {
52  friend class boost::serialization::access;
59  template<class Archive>
60  void serialize(Archive & archive, const unsigned int version)
61  {
62  //archive & mLocation; //earlier versions of boost are unable to do this. See #1709
63  }
64 
65 private:
66 
68  c_vector<double, DIM> mLocation;
69 
70 public:
71 
86  ChastePoint(double v1=0, double v2=0, double v3=0);
87 
95  ChastePoint(std::vector<double> coords);
96 
102  ChastePoint(c_vector<double, DIM> location);
103 
107  c_vector<double, DIM>& rGetLocation();
108 
112  const c_vector<double, DIM>& rGetLocation() const;
113 
119  double operator[] (unsigned i) const;
120 
126  double GetWithDefault(unsigned i, double def=0.0) const;
127 
134  void SetCoordinate(unsigned i, double value);
135 
142  bool IsSamePoint(const ChastePoint<DIM>& rPoint) const;
143 };
144 
145 
147 // Declare identifier for the serializer
149 
150 namespace boost
151 {
152 namespace serialization
153 {
154 
155 template<class Archive, unsigned SPACE_DIM>
156 inline void save_construct_data(
157  Archive & ar, const ChastePoint<SPACE_DIM> * t, const unsigned int file_version)
158 {
159  for (unsigned i = 0; i < SPACE_DIM; i ++)
160  {
161  //we archive coordinates of mLocation one by one
162  //this is because earlier version of boost (<1.40, I think) cannot archive c_vectors
163  double coord = t->GetWithDefault(i);
164  ar & coord;
165  }
166 }
167 
172 template<class Archive,unsigned SPACE_DIM>
173 inline void load_construct_data(
174  Archive & ar, ChastePoint<SPACE_DIM> * t, const unsigned int file_version)
175 {
176  std::vector<double> coords;
177  coords.resize(SPACE_DIM);
178  for (unsigned i=0; i<SPACE_DIM; i++)
179  {
180  double coordinate;
181  ar & coordinate;//resume coordinates one by one
182  coords[i] = coordinate;
183  }
184  //use constructor with standard vectors to re-build the object
185  ::new(t)ChastePoint<SPACE_DIM>(coords);
186 }
187 }
188 } // namespace ...
189 
190 
196 template<>
197 class ChastePoint<0>
198 {
199 public:
208  ChastePoint(double v1=0, double v2=0, double v3=0);
209 
216  double operator[] (unsigned i) const;
217 };
218 
219 #endif //_CHASTEPOINT_HPP_
c_vector< double, DIM > & rGetLocation()
Definition: ChastePoint.cpp:76
double GetWithDefault(unsigned i, double def=0.0) const
Definition: ChastePoint.cpp:95
double operator[](unsigned i) const
Definition: ChastePoint.cpp:88
c_vector< double, DIM > mLocation
Definition: ChastePoint.hpp:68
#define EXPORT_TEMPLATE_CLASS_SAME_DIMS(CLASS)
void SetCoordinate(unsigned i, double value)
ChastePoint(double v1=0, double v2=0, double v3=0)
Definition: ChastePoint.cpp:44
void serialize(Archive &archive, const unsigned int version)
Definition: ChastePoint.hpp:60
gcov doesn&#39;t like this file...
bool IsSamePoint(const ChastePoint< DIM > &rPoint) const