Chaste  Release::2017.1
AbstractPurkinjeCellFactory.hpp
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35 
36 #ifndef ABSTRACTPURKINJECELLFACTORY_HPP_
37 #define ABSTRACTPURKINJECELLFACTORY_HPP_
38 
39 #include "AbstractCardiacCellFactory.hpp"
40 #include "MixedDimensionMesh.hpp"
41 #include "FakeBathCell.hpp"
48 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM>
49 class AbstractPurkinjeCellFactory : public AbstractCardiacCellFactory<ELEMENT_DIM,SPACE_DIM>
50 {
51 private:
59  void ReadJunctionsFile();
60 
61 protected:
64 
66  std::set<unsigned> mLocalPurkinjeNodes;
67 
69  std::map<unsigned, double> mJunctionMap;
70 
78  AbstractCardiacCellInterface* pCardiacCell)=0;
79 
88  void CreateJunction(const Node<SPACE_DIM>* pNode,
89  AbstractCardiacCellInterface* pPurkinjeCell,
90  AbstractCardiacCellInterface* pCardiacCell,
91  double resistance);
92 
93 
103  void CreateJunctionFromFile(const Node<SPACE_DIM>* pNode,
104  AbstractCardiacCellInterface* pPurkinjeCell,
105  AbstractCardiacCellInterface* pCardiacCell);
106 
107 
108 public:
109 
110  /* Constructor does nothing */
112 
113 
117 
129  AbstractCardiacCellInterface* pCardiacCell);
130 
139  virtual void FinalisePurkinjeCellCreation(std::vector< AbstractCardiacCellInterface* >* pPurkinjeCellsDistributed,
140  unsigned lo, unsigned hi)
141  {
142  }
143 
149 };
150 
151 #endif // ABSTRACTPURKINJECELLFACTORY_HPP_
AbstractCardiacCellInterface * CreatePurkinjeCellForNode(Node< SPACE_DIM > *pNode, AbstractCardiacCellInterface *pCardiacCell)
Definition: Node.hpp:58
MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM > * GetMixedDimensionMesh()
MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM > * mpMixedDimensionMesh
virtual void FinalisePurkinjeCellCreation(std::vector< AbstractCardiacCellInterface * > *pPurkinjeCellsDistributed, unsigned lo, unsigned hi)
virtual AbstractCardiacCellInterface * CreatePurkinjeCellForTissueNode(Node< SPACE_DIM > *pNode, AbstractCardiacCellInterface *pCardiacCell)=0
void CreateJunctionFromFile(const Node< SPACE_DIM > *pNode, AbstractCardiacCellInterface *pPurkinjeCell, AbstractCardiacCellInterface *pCardiacCell)
void SetMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)
std::map< unsigned, double > mJunctionMap
void CreateJunction(const Node< SPACE_DIM > *pNode, AbstractCardiacCellInterface *pPurkinjeCell, AbstractCardiacCellInterface *pCardiacCell, double resistance)