AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > Class Template Reference

#include <AbstractTetrahedralMeshWriter.hpp>

Inherits AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Inherited by CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >, CmguiMeshWriter< DIM, DIM >, MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >, and TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Collaboration diagram for AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >:

[legend]

List of all members.

Public Member Functions
	AbstractTetrahedralMeshWriter (const std::string &rDirectory, const std::string &rBaseName, const bool clearOutputDir=true)
	~AbstractTetrahedralMeshWriter ()
virtual void	WriteFilesUsingMesh (AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > &rMesh)
std::vector< double >	GetNextNode ()
ElementData	GetNextElement ()
Protected Attributes
bool	mIndexFromZero
bool	mWriteMetaFile
unsigned	mNodeCounterForParallelMesh
unsigned	mElementCounterForParallelMesh
Private Member Functions
virtual void	WriteFilesUsingParallelMesh ()
Private Attributes
AbstractTetrahedralMesh < ELEMENT_DIM, SPACE_DIM > *	mpMesh
unsigned	mNodesPerElement
DistributedTetrahedralMesh < ELEMENT_DIM, SPACE_DIM > *	mpParallelMesh
MeshWriterIterators < ELEMENT_DIM, SPACE_DIM > *	mpIters
NodeMap *	mpNodeMap

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >

An abstract tetrahedral mesh writer class.

Definition at line 60 of file AbstractTetrahedralMeshWriter.hpp.

Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::AbstractTetrahedralMeshWriter	(	const std::string &	rDirectory,
		const std::string &	rBaseName,
		const bool	clearOutputDir = `true`
	)			`[inline]`

Constructor.

Parameters:

	rDirectory	the directory in which to write the mesh to file
	rBaseName	the base name of the files in which to write the mesh data
	clearOutputDir	whether to clean the directory (defaults to true)

Definition at line 58 of file AbstractTetrahedralMeshWriter.cpp.

References AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpIters.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::~AbstractTetrahedralMeshWriter ( ) [inline]

Destructor just deletes the node map if memory has been allocated for it

Definition at line 76 of file AbstractTetrahedralMeshWriter.cpp.

References AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpIters, and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpNodeMap.

Member Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

ElementData AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement ( ) [inline, virtual]

Returns:: the data (indices/attributes) of the next element to be written to file

Reimplemented from AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 147 of file AbstractTetrahedralMeshWriter.cpp.

Referenced by TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteElementsAsFaces(), TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles(), MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles(), and CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< double > AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode ( ) [inline, virtual]

Returns:: the coordinates of the next node to be written to file

Reimplemented from AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 97 of file AbstractTetrahedralMeshWriter.cpp.

References PetscTools::AmMaster(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNodeCounterForParallelMesh, AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpIters, AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpMesh, and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpParallelMesh.

Referenced by TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles(), MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles(), and CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh ( AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > & rMesh ) [inline, virtual]

Write a const mesh to file. Used by the serialization methods and avoids iterators...

Parameters:

rMesh

the mesh

Todo:: #1322 Mesh should really be const!

Todo:: #1322 Mesh should be const

Todo:: #1322 This should be const too

Definition at line 222 of file AbstractTetrahedralMeshWriter.cpp.

Referenced by Hdf5ToCmguiConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToCmguiConverter(), Hdf5ToMeshalyzerConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToMeshalyzerConverter(), CardiacElectroMechanicsProblem< DIM >::Initialise(), AbstractTetrahedralMesh< SPACE_DIM, SPACE_DIM >::save(), CardiacElectroMechanicsProblem< DIM >::Solve(), and CmguiDeformedSolutionsWriter< DIM >::WriteInitialMesh().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingParallelMesh ( ) [inline, private, virtual]

Write a parallel mesh to file. Used by the serialization methods

Definition at line 296 of file AbstractTetrahedralMeshWriter.cpp.

References PetscTools::AmMaster(), PetscTools::Barrier(), AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNumNodes, AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpMesh, AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpParallelMesh, AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::SetNextBoundaryFace(), and AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles().

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh().

Member Data Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mElementCounterForParallelMesh [protected]

Used by master process for polling processes for the next element

Definition at line 82 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

bool AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mIndexFromZero [protected]

True if input data is numbered from zero, false otherwise

Definition at line 79 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >::CmguiMeshWriter(), MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::MeshalyzerMeshWriter(), and MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNodeCounterForParallelMesh [protected]

Used by master process for polling processes for the next node

Definition at line 81 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNodesPerElement [private]

Same as (ELEMENT_DIM+1), except when writing a quadratic mesh!

Definition at line 70 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

MeshWriterIterators<ELEMENT_DIM,SPACE_DIM>* AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpIters [private]

Handy iterators so that we know the next node/element to be written

Definition at line 73 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::AbstractTetrahedralMeshWriter(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::~AbstractTetrahedralMeshWriter().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpMesh [private]

Pointer to the mesh (if we are writing from the a mesh)

Definition at line 69 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingParallelMesh().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

NodeMap* AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpNodeMap [private]

Node map to be used when writing a mesh that has deleted nodes

Definition at line 75 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::~AbstractTetrahedralMeshWriter().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

DistributedTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpParallelMesh [private]

Another pointer to the mesh, produced by dynamic cast

Definition at line 71 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode(), AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingParallelMesh().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

bool AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::mWriteMetaFile [protected]

Whether to write a metafile (only used by MeshylazerMeshWriter)

Definition at line 80 of file AbstractTetrahedralMeshWriter.hpp.

Referenced by MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::MeshalyzerMeshWriter(), and MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles().

The documentation for this class was generated from the following files:

/tmp/release_2.0/mesh/src/writer/AbstractTetrahedralMeshWriter.hpp
/tmp/release_2.0/mesh/src/writer/AbstractTetrahedralMeshWriter.cpp

AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > Class Template Reference

Public Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> class AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >