MonodomainPde< SPACE_DIM > Class Template Reference

#include <MonodomainPde.hpp>

Inheritance diagram for MonodomainPde< SPACE_DIM >:

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Collaboration diagram for MonodomainPde< SPACE_DIM >:

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List of all members.

Public Member Functions

 MonodomainPde (AbstractCardiacCellFactory< SPACE_DIM > *pCellFactory)
 Constructor.
double ComputeLinearSourceTerm (const ChastePoint< SPACE_DIM > &)
double ComputeNonlinearSourceTerm (const ChastePoint< SPACE_DIM > &, double)
virtual c_matrix< double,
SPACE_DIM, SPACE_DIM > 
ComputeDiffusionTerm (const ChastePoint< SPACE_DIM > &, Element< SPACE_DIM, SPACE_DIM > *pElement)
double ComputeNonlinearSourceTermAtNode (const Node< SPACE_DIM > &node, double)
double ComputeDuDtCoefficientFunction (const ChastePoint< SPACE_DIM > &)

Friends

class TestMonodomainPde


Detailed Description

template<unsigned SPACE_DIM>
class MonodomainPde< SPACE_DIM >

MonodomainPde class.

The monodomain equation is of the form: A (C dV/dt + Iionic) +Istim = Div( sigma_i Grad(V) )

where A is the surface area to volume ratio (1/cm), C is the capacitance (uF/cm^2), sigma_i is the intracellular conductivity (mS/cm), I_ionic is the ionic current (uA/cm^2), I_stim is the intracellular stimulus current (uA/cm^3).

Note that default values of A, C and sigma_i are stored in the parent class

Definition at line 55 of file MonodomainPde.hpp.


Member Function Documentation

template<unsigned SPACE_DIM>
double MonodomainPde< SPACE_DIM >::ComputeLinearSourceTerm ( const ChastePoint< SPACE_DIM > &   )  [inline, virtual]

This should not be called; use ComputeLinearSourceTermAtNode instead

Implements AbstractLinearParabolicPde< SPACE_DIM >.

Definition at line 43 of file MonodomainPde.cpp.

template<unsigned SPACE_DIM>
double MonodomainPde< SPACE_DIM >::ComputeNonlinearSourceTerm ( const ChastePoint< SPACE_DIM > &  ,
double   
) [inline, virtual]

This should not be called; use ComputeNonlinearSourceTermAtNode instead

Implements AbstractLinearParabolicPde< SPACE_DIM >.

Definition at line 49 of file MonodomainPde.cpp.

template<unsigned SPACE_DIM>
c_matrix< double, SPACE_DIM, SPACE_DIM > MonodomainPde< SPACE_DIM >::ComputeDiffusionTerm ( const ChastePoint< SPACE_DIM > &  ,
Element< SPACE_DIM, SPACE_DIM > *  pElement 
) [inline, virtual]

Virtual, since overridden by Fisher

Implements AbstractLinearParabolicPde< SPACE_DIM >.

Definition at line 58 of file MonodomainPde.cpp.

template<unsigned SPACE_DIM>
double MonodomainPde< SPACE_DIM >::ComputeDuDtCoefficientFunction ( const ChastePoint< SPACE_DIM > &  x  )  [inline, virtual]

The function c(x) in "c(x) du/dt = Grad.(DiffusionTerm(x)*Grad(u))+LinearSourceTerm(x)+NonlinearSourceTerm(x, u)"

Implements AbstractLinearParabolicPde< SPACE_DIM >.

Definition at line 78 of file MonodomainPde.cpp.


The documentation for this class was generated from the following files:

Generated on Wed Mar 18 12:52:41 2009 for Chaste by  doxygen 1.5.5