DeltaNotchSrnModel Member List

This is the complete list of members for DeltaNotchSrnModel, including all inherited members.

AbstractOdeSrnModel(const AbstractOdeSrnModel &rModel)	AbstractOdeSrnModel	protected
AbstractOdeSrnModel(unsigned stateSize, boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	AbstractOdeSrnModel
AbstractSrnModel(const AbstractSrnModel &rModel)	AbstractSrnModel	protected
AbstractSrnModel()	AbstractSrnModel
AddMergedEdgeSrn(AbstractSrnModel *pMergedEdgeSrn)	AbstractSrnModel	virtual
AddShrunkEdgeSrn(AbstractSrnModel *pShrunkEdgeSrn)	AbstractSrnModel	virtual
AddShrunkEdgeToInterior(AbstractSrnModel *pShrunkEdgeSrn)	AbstractSrnModel	virtual
AddSrnQuantities(AbstractSrnModel *pOtherSrn, const double scale=1.0)	AbstractSrnModel	virtual
AdjustOdeParameters(double currentTime)	CellCycleModelOdeHandler	protectedvirtual
boost::serialization::access	DeltaNotchSrnModel	friend
CellCycleModelOdeHandler(const CellCycleModelOdeHandler &rHandler)	CellCycleModelOdeHandler	protected
CellCycleModelOdeHandler(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	CellCycleModelOdeHandler
CreateSrnModel()	DeltaNotchSrnModel	virtual
DeltaNotchSrnModel(const DeltaNotchSrnModel &rModel)	DeltaNotchSrnModel	protected
DeltaNotchSrnModel(boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	DeltaNotchSrnModel
GetCell()	AbstractSrnModel
GetDelta()	DeltaNotchSrnModel
GetDt()	CellCycleModelOdeHandler
GetEdgeLocalIndex()	AbstractSrnModel
GetIdentifier() const	Identifiable
GetMeanNeighbouringDelta()	DeltaNotchSrnModel
GetNotch()	DeltaNotchSrnModel
GetOdeSolver() const	CellCycleModelOdeHandler
GetOdeSystem() const	CellCycleModelOdeHandler
GetProteinConcentrations() const	CellCycleModelOdeHandler
GetSimulatedToTime() const	AbstractSrnModel
HasEdgeModel() const	AbstractSrnModel
Initialise()	DeltaNotchSrnModel	virtual
AbstractOdeSrnModel::Initialise(AbstractOdeSystem *pOdeSystem)	AbstractOdeSrnModel	protected
InitialiseDaughterCell()	AbstractSrnModel	virtual
mDt	CellCycleModelOdeHandler	protected
mEdgeLocalIndex	AbstractSrnModel	protected
mFinishedRunningOdes	CellCycleModelOdeHandler	protected
mInitialConditions	AbstractOdeSrnModel	protected
mIsEdgeBasedModel	AbstractSrnModel	protected
mLastTime	CellCycleModelOdeHandler	protected
mpCell	AbstractSrnModel	protected
mpOdeSolver	CellCycleModelOdeHandler	protected
mpOdeSystem	CellCycleModelOdeHandler	protected
mSimulatedToTime	AbstractSrnModel	protected
mStateSize	AbstractOdeSrnModel	protected
AbstractSrnModel::operator=(const AbstractSrnModel &)	AbstractSrnModel	private
OutputSrnModelInfo(out_stream &rParamsFile)	AbstractSrnModel
OutputSrnModelParameters(out_stream &rParamsFile)	DeltaNotchSrnModel	virtual
ResetForDivision()	AbstractOdeSrnModel	virtual
ScaleSrnVariables(const double theta)	AbstractOdeSrnModel	virtual
serialize(Archive &archive, const unsigned int version)	DeltaNotchSrnModel	inlineprivate
SetCell(CellPtr pCell)	AbstractSrnModel	virtual
SetDt(double timeStep)	CellCycleModelOdeHandler
SetEdgeLocalIndex(unsigned index)	AbstractSrnModel
SetEdgeModelIndicator(const bool isEdgeModel)	AbstractSrnModel
SetInitialConditions(std::vector< double > initialConditions)	AbstractOdeSrnModel
SetLastTime(double lastTime)	CellCycleModelOdeHandler
SetOdeSystem(AbstractOdeSystem *pOdeSystem)	CellCycleModelOdeHandler
SetProteinConcentrationsForTestsOnly(double lastTime, std::vector< double > proteinConcentrations)	CellCycleModelOdeHandler
SetSimulatedToTime(double simulatedToTime)	AbstractSrnModel
SetStateVariables(const std::vector< double > &rStateVariables)	CellCycleModelOdeHandler
SimulateToCurrentTime()	DeltaNotchSrnModel	virtual
SolveOdeToTime(double currentTime)	CellCycleModelOdeHandler	protected
SplitEdgeSrn(const double relativePosition)	AbstractSrnModel	virtual
TidyTemplatedExportIdentifier(std::string identifier) const	Identifiable	private
UpdateDeltaNotch()	DeltaNotchSrnModel
~AbstractOdeSrnModel()	AbstractOdeSrnModel	virtual
~AbstractSrnModel()	AbstractSrnModel	virtual
~CellCycleModelOdeHandler()	CellCycleModelOdeHandler	virtual
~Identifiable()	Identifiable	virtual