Chaste Release::3.1
SimpleLinearEllipticSolver.hpp
00001 /*
00002 
00003 Copyright (c) 2005-2012, University of Oxford.
00004 All rights reserved.
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00006 University of Oxford means the Chancellor, Masters and Scholars of the
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00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
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00034 */
00035 
00036 #ifndef SIMPLELINEARELLIPTICSOLVER_HPP_
00037 #define SIMPLELINEARELLIPTICSOLVER_HPP_
00038 
00039 #include "AbstractAssemblerSolverHybrid.hpp"
00040 #include "AbstractStaticLinearPdeSolver.hpp"
00041 #include "AbstractLinearEllipticPde.hpp"
00042 
00048 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00049 class SimpleLinearEllipticSolver
00050     : public AbstractAssemblerSolverHybrid<ELEMENT_DIM, SPACE_DIM, 1, NORMAL>,
00051       public AbstractStaticLinearPdeSolver<ELEMENT_DIM, SPACE_DIM, 1>
00052 {
00053 protected:
00054 
00056     AbstractLinearEllipticPde<ELEMENT_DIM,SPACE_DIM>* mpEllipticPde;
00057 
00070     virtual c_matrix<double, 1*(ELEMENT_DIM+1), 1*(ELEMENT_DIM+1)> ComputeMatrixTerm(
00071         c_vector<double, ELEMENT_DIM+1>& rPhi,
00072         c_matrix<double, SPACE_DIM, ELEMENT_DIM+1>& rGradPhi,
00073         ChastePoint<SPACE_DIM>& rX,
00074         c_vector<double,1>& rU,
00075         c_matrix<double,1,SPACE_DIM>& rGradU,
00076         Element<ELEMENT_DIM,SPACE_DIM>* pElement);
00077 
00089     virtual c_vector<double,1*(ELEMENT_DIM+1)> ComputeVectorTerm(
00090         c_vector<double, ELEMENT_DIM+1>& rPhi,
00091         c_matrix<double, SPACE_DIM, ELEMENT_DIM+1>& rGradPhi,
00092         ChastePoint<SPACE_DIM>& rX,
00093         c_vector<double,1>& rU,
00094         c_matrix<double,1,SPACE_DIM>& rGradU,
00095         Element<ELEMENT_DIM,SPACE_DIM>* pElement);
00096 
00097 
00098     // Note: does not have to provide a ComputeVectorSurfaceTerm for surface integrals,
00099     // the parent AbstractAssemblerSolverHybrid assumes natural Neumann BCs and uses a
00100     // NaturalNeumannSurfaceTermAssembler for assembling this part of the vector.
00101 
00102 
00103 
00112     void SetupLinearSystem(Vec currentSolution, bool computeMatrix)
00113     {
00114         this->SetupGivenLinearSystem(currentSolution, computeMatrix, this->mpLinearSystem);
00115     }
00116 
00117 public:
00118 
00127     SimpleLinearEllipticSolver(AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* pMesh,
00128                                AbstractLinearEllipticPde<ELEMENT_DIM,SPACE_DIM>* pPde,
00129                                BoundaryConditionsContainer<ELEMENT_DIM,SPACE_DIM,1>* pBoundaryConditions,
00130                                unsigned numQuadPoints = 2);
00131 
00138     void InitialiseForSolve(Vec initialSolution = NULL);
00139 };
00140 
00141 #endif /*SIMPLELINEARELLIPTICSOLVER_HPP_*/