Chaste Release::3.1
Nash2004ContractionModel.hpp
00001 /*
00002 
00003 Copyright (c) 2005-2012, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
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00015    this list of conditions and the following disclaimer.
00016  * Redistributions in binary form must reproduce the above copyright notice,
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00034 */
00035 
00036 #ifndef NASH2004CONTRACTIONMODEL_HPP_
00037 #define NASH2004CONTRACTIONMODEL_HPP_
00038 
00039 #include "AbstractOdeBasedContractionModel.hpp"
00040 #include "OdeSystemInformation.hpp"
00041 #include "Exception.hpp"
00042 
00060 class Nash2004ContractionModel : public AbstractOdeBasedContractionModel
00061 {
00063     static const double kTa;
00064 
00066     static const double e0ByT0;
00067 
00069     double mScaledVoltage;
00070 
00071 public:
00073     Nash2004ContractionModel() : AbstractOdeBasedContractionModel(1)
00074     {
00075         this->mpSystemInfo = OdeSystemInformation<Nash2004ContractionModel>::Instance();
00076 
00077         mScaledVoltage = 0.0;
00078         this->mStateVariables.push_back(0.0);
00079     }
00080 
00087     void EvaluateYDerivatives(double time, const std::vector<double>& rY, std::vector<double>& rDY)
00088     {
00089         double epsilon = (mScaledVoltage < 0.05 ? e0ByT0 : 10*e0ByT0);
00090         rDY[0] = epsilon * (kTa*mScaledVoltage - rY[0]);
00091     }
00092 
00097     void SetInputParameters(ContractionModelInputParameters& rInputParameters)
00098     {
00099         assert(rInputParameters.voltage != DOUBLE_UNSET);
00100         mScaledVoltage = (rInputParameters.voltage+85)/125;
00101     }
00102 
00108     void SetStretchAndStretchRate(double stretch, double stretchRate)
00109     {
00110     }
00111 
00115     double GetActiveTension()
00116     {
00117         return rGetStateVariables()[0];
00118     }
00119 
00124     double GetNextActiveTension()
00125     {
00126         return mTemporaryStateVariables[0];
00127     }
00128 
00129 
00133     bool IsStretchDependent()
00134     {
00135         return false;
00136     }
00137 
00141     bool IsStretchRateDependent()
00142     {
00143         return false;
00144     }
00145 };
00146 
00147 
00148 
00149 #endif /*NASH2004CONTRACTIONMODEL_HPP_*/