Chaste Release::3.1
Element.hpp
00001 /*
00002 
00003 Copyright (c) 2005-2012, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
00014  * Redistributions of source code must retain the above copyright notice,
00015    this list of conditions and the following disclaimer.
00016  * Redistributions in binary form must reproduce the above copyright notice,
00017    this list of conditions and the following disclaimer in the documentation
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00034 */
00035 
00036 
00037 #ifndef _ELEMENT_HPP_
00038 #define _ELEMENT_HPP_
00039 
00040 #include "UblasMatrixInclude.hpp"
00041 #include "UblasVectorInclude.hpp"
00042 
00043 #include <vector>
00044 
00045 #include "AbstractTetrahedralElement.hpp"
00046 #include "Node.hpp"
00047 #include "ChastePoint.hpp"
00048 
00052 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00053 class Element : public AbstractTetrahedralElement<ELEMENT_DIM, SPACE_DIM>
00054 {
00055 public:
00056 
00064     Element(unsigned index, const std::vector<Node<SPACE_DIM>*>& rNodes, bool registerWithNodes=true);
00065 
00072     Element(const Element& rElement, const unsigned index);
00073 
00077     void RegisterWithNodes();
00078 
00083     void MarkAsDeleted();
00084 
00091     void UpdateNode(const unsigned& rIndex, Node<SPACE_DIM>* pNode);
00092 
00098     void ResetIndex(unsigned index);
00099 
00111     c_vector<double,SPACE_DIM+1> CalculateCircumsphere(c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian, c_matrix<double, ELEMENT_DIM, SPACE_DIM>& rInverseJacobian);
00112 
00116     double CalculateCircumsphereVolume();
00117 
00123     double CalculateQuality();
00124 
00128     c_vector <double, 2> CalculateMinMaxEdgeLengths();
00129 
00137     c_vector<double, SPACE_DIM+1> CalculateInterpolationWeights(const ChastePoint<SPACE_DIM>& rTestPoint);
00138 
00146     c_vector<double, SPACE_DIM+1> CalculateInterpolationWeightsWithProjection(const ChastePoint<SPACE_DIM>& rTestPoint);
00147 
00157     c_vector<double, SPACE_DIM> CalculateXi(const ChastePoint<SPACE_DIM>& rTestPoint);
00158 
00165     bool IncludesPoint(const ChastePoint<SPACE_DIM>& rTestPoint, bool strict=false);
00166 
00167 };
00168 
00169 #endif //_ELEMENT_HPP_