CellMLToSharedLibraryConverter.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef CELLMLTOSHAREDLIBRARYCONVERTER_HPP_
00030 #define CELLMLTOSHAREDLIBRARYCONVERTER_HPP_
00031 
00032 #include <string>
00033 #include <vector>
00034 
00035 #include "DynamicCellModelLoader.hpp"
00036 #include "FileFinder.hpp"
00037 #include "OutputFileHandler.hpp"
00038 
00043 class CellMLToSharedLibraryConverter
00044 {
00045 public:
00055     CellMLToSharedLibraryConverter(bool preserveGeneratedSources=false,
00056                                    std::string component="heart");
00057 
00071     DynamicCellModelLoader* Convert(const FileFinder& rFilePath,
00072                                     bool isCollective=true);
00073 
00082     void CreateOptionsFile(const OutputFileHandler& rHandler,
00083                            const std::string& rModelName,
00084                            const std::vector<std::string>& rArgs,
00085                            const std::string& rExtraXml="");
00086 
00087 private:
00097     void ConvertCellmlToSo(const std::string& rCellmlFullPath,
00098                            const std::string& rCellmlFolder,
00099                            const std::string& rModelLeafName);
00100 
00102     bool mPreserveGeneratedSources;
00103 
00105     std::string mComponentName;
00106 };
00107 
00108 #endif /*CELLMLTOSHAREDLIBRARYCONVERTER_HPP_*/

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