AbstractCorrectionTermAssembler.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 
00030 #ifndef ABSTRACTCORRECTIONTERMASSEMBLER_HPP_
00031 #define ABSTRACTCORRECTIONTERMASSEMBLER_HPP_
00032 
00033 
00034 #include "AbstractCardiacFeObjectAssembler.hpp"
00035 #include "AbstractCardiacTissue.hpp"
00036 
00040 template<unsigned ELEM_DIM,unsigned SPACE_DIM,unsigned PROBLEM_DIM>
00041 class AbstractCorrectionTermAssembler
00042     : public AbstractCardiacFeObjectAssembler<ELEM_DIM,SPACE_DIM,PROBLEM_DIM,true,false,CARDIAC>
00043 {
00044 protected:
00046     double mIionicInterp;
00047 
00049     std::vector<double> mStateVariablesAtQuadPoint;
00050     
00054     void ResetInterpolatedQuantities( void );
00055     
00061     std::vector<bool> mElementsHasIdenticalCellModels;
00062     
00069     void IncrementInterpolatedQuantities(double phiI, const Node<SPACE_DIM>* pNode);
00070 
00071   
00079     bool ElementAssemblyCriterion(Element<ELEM_DIM,SPACE_DIM>& rElement);
00080     
00081 public:
00082 
00090     AbstractCorrectionTermAssembler(AbstractTetrahedralMesh<ELEM_DIM,SPACE_DIM>* pMesh,
00091                                     AbstractCardiacTissue<ELEM_DIM,SPACE_DIM>* pTissue,
00092                                     unsigned numQuadPoints = 2);
00093 };
00094 
00095 
00096 
00097 #endif /*ABSTRACTCORRECTIONTERMASSEMBLER_HPP_*/

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