RadialSloughingCellKiller.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2010
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 #ifndef RADIALSLOUGHINGCELLKILLER_HPP_
00029 #define RADIALSLOUGHINGCELLKILLER_HPP_
00030 
00031 #include "AbstractCellKiller.hpp"
00032 
00033 #include "ChasteSerialization.hpp"
00034 #include <boost/serialization/base_object.hpp>
00035 
00042 class RadialSloughingCellKiller : public AbstractCellKiller<2>
00043 {
00044 private:
00045 
00047     c_vector<double,2> mCentre;
00048 
00050     double mRadius;
00051 
00052     friend class boost::serialization::access;
00053     template<class Archive>
00054     void serialize(Archive & archive, const unsigned int version)
00055     {
00056         archive & boost::serialization::base_object<AbstractCellKiller<2> >(*this);
00057     }
00058 
00059 public:
00060 
00068     RadialSloughingCellKiller(AbstractCellPopulation<2>* pCellPopulation,
00069                               c_vector<double,2> centre,
00070                               double radius);
00071 
00075     c_vector<double,2> GetCentre() const;
00076 
00080     double GetRadius() const;
00081 
00085     virtual void TestAndLabelCellsForApoptosisOrDeath();
00086 
00095     void OutputCellKillerParameters(out_stream& rParamsFile);
00096 };
00097 
00098 #include "SerializationExportWrapper.hpp"
00099 CHASTE_CLASS_EXPORT(RadialSloughingCellKiller)
00100 
00101 namespace boost
00102 {
00103 namespace serialization
00104 {
00108 template<class Archive>
00109 inline void save_construct_data(
00110     Archive & ar, const RadialSloughingCellKiller * t, const BOOST_PFTO unsigned int file_version)
00111 {
00112     // Save data required to construct instance
00113     const AbstractCellPopulation<2>* const p_cell_population = t->GetCellPopulation();
00114     ar & p_cell_population;
00115     c_vector<double,2> centre = t->GetCentre();
00116     ar & centre[0];
00117     ar & centre[1];
00118     double radius = t->GetRadius();
00119     ar & radius;
00120 }
00121 
00125 template<class Archive>
00126 inline void load_construct_data(
00127     Archive & ar, RadialSloughingCellKiller * t, const unsigned int file_version)
00128 {
00129     // Retrieve data from archive required to construct new instance
00130     AbstractCellPopulation<2>* p_cell_population;
00131     ar & p_cell_population;
00132     c_vector<double,2> centre;
00133     ar & centre[0];
00134     ar & centre[1];
00135     double radius;
00136     ar & radius;
00137 
00138     // Invoke inplace constructor to initialise instance
00139     ::new(t)RadialSloughingCellKiller(p_cell_population, centre, radius);
00140 }
00141 }
00142 } // namespace ...
00143 
00144 
00145 #endif /*RADIALSLOUGHINGCELLKILLER_HPP_*/
00146 

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