Cylindrical2dVertexMesh.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2010
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 #ifndef CYLINDRICAL2DVERTEXMESH_HPP_
00029 #define CYLINDRICAL2DVERTEXMESH_HPP_
00030 
00031 #include "ChasteSerialization.hpp"
00032 #include <boost/serialization/base_object.hpp>
00033 
00034 #include "MutableVertexMesh.hpp"
00035 
00044 class Cylindrical2dVertexMesh : public MutableVertexMesh<2,2>
00045 {
00046     friend class TestCylindrical2dVertexMesh;
00047 
00048 private:
00049 
00051     double mWidth;
00052 
00054     friend class boost::serialization::access;
00065     template<class Archive>
00066     void serialize(Archive & archive, const unsigned int version)
00067     {
00068         archive & boost::serialization::base_object<MutableVertexMesh<2,2> >(*this);
00069         archive & mWidth;
00070     }
00071 
00075     Cylindrical2dVertexMesh();
00076 
00077 public:
00078 
00088     Cylindrical2dVertexMesh(double width,
00089                             std::vector<Node<2>*> nodes,
00090                             std::vector<VertexElement<2,2>*> vertexElements,
00091                             double cellRearrangementThreshold=0.01,
00092                             double t2Threshold=0.001);
00093 
00097     ~Cylindrical2dVertexMesh();
00098 
00109     c_vector<double, 2> GetVectorFromAtoB(const c_vector<double, 2>& rLocation1, const c_vector<double, 2>& rLocation2);
00110 
00120     void SetNode(unsigned nodeIndex, ChastePoint<2> point);
00121 
00131     double GetWidth(const unsigned& rDimension) const;
00132 
00140     unsigned AddNode(Node<2>* pNewNode);
00141 
00149     double GetVolumeOfElement(unsigned index);
00150 
00158      c_vector<double, 2> GetCentroidOfElement(unsigned index);
00159 };
00160 
00161 #include "SerializationExportWrapper.hpp"
00162 CHASTE_CLASS_EXPORT(Cylindrical2dVertexMesh)
00163 
00164 #endif /*CYLINDRICAL2DVERTEXMESH_HPP_*/

Generated on Mon Nov 1 12:35:16 2010 for Chaste by  doxygen 1.5.5