PetscTools.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2010
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef PETSCTOOLS_HPP_
00030 #define PETSCTOOLS_HPP_
00031 
00032 #include <string>
00033 #include <vector>
00034 
00035 #ifndef SPECIAL_SERIAL
00036 #include <petsc.h>
00037 #include <petscvec.h>
00038 #include <petscmat.h>
00039 #endif //SPECIAL_SERIAL
00040 
00041 #define EXIT_IF_PARALLEL if(!PetscTools::IsSequential()){TS_TRACE("This test does not pass in parallel yet.");return;}
00042 #define EXIT_IF_SEQUENTIAL if(PetscTools::IsSequential()){TS_TRACE("This test is not meant to be executed in sequential.");return;}
00043 
00044 
00045 #ifndef NDEBUG
00046 // Uncomment this to trace calls to PetscTools::Barrier
00047 //#define DEBUG_BARRIERS
00048 #endif
00049 
00050 
00054 class PetscTools
00055 {
00056 private:
00058     static bool mPetscIsInitialised;
00059 
00061     static unsigned mNumProcessors;
00062 
00064     static unsigned mMaxNumNonzerosIfMatMpiAij;
00065 
00066 #ifdef DEBUG_BARRIERS
00067 
00068     static unsigned mNumBarriers;
00069 #endif
00070 
00072     static unsigned mRank;
00073 
00075     static inline void CheckCache()
00076     {
00077         if (mNumProcessors == 0)
00078         {
00079             ResetCache();
00080         }
00081     }
00082 
00083 public:
00084 
00088     static const unsigned MASTER_RANK=0;
00089 
00094     static void ResetCache();
00095 
00099     static bool IsSequential();
00100 
00104     static unsigned GetNumProcs();
00105 
00111     static unsigned GetMyRank();
00112 
00118     static bool AmMaster();
00119 
00125     static bool AmTopMost();
00126 
00133     static void Barrier(const std::string callerId="");
00134 
00135 #ifndef SPECIAL_SERIAL
00136 
00141     static Vec CreateVec(int size);
00142 
00150     static Vec CreateVec(int size, double value);
00151 
00157     static Vec CreateVec(std::vector<double> data);
00158 
00170     static void SetupMat(Mat& rMat, int numRows, int numColumns,
00171                          MatType matType=(MatType) MATMPIAIJ,
00172                          int numLocalRows=PETSC_DECIDE,
00173                          int numLocalColumns=PETSC_DECIDE);
00174 
00181     static bool ReplicateBool(bool flag);
00182 
00189     static void ReplicateException(bool flag);
00190 
00197     static void DumpPetscObject(const Mat& rMat, const std::string& rOutputFileFullPath);
00198 
00205     static void DumpPetscObject(const Vec& rVec, const std::string& rOutputFileFullPath);
00206 
00213     static void ReadPetscObject(Mat& rMat, const std::string& rOutputFileFullPath);
00214 
00221     static void ReadPetscObject(Vec& rVec, const std::string& rOutputFileFullPath);
00222 
00231     static void SetMaxNumNonzerosIfMatMpiAij(unsigned maxColsPerRowIfMatMpiAij);
00232 
00233 #endif //SPECIAL_SERIAL
00234 
00235 };
00236 
00237 #endif /*PETSCTOOLS_HPP_*/

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